scallops.reads.assign_barcodes_to_labels

scallops.reads.assign_barcodes_to_labels(df_reads, sort_by=['Q_mean', 'peak'])

Call the barcode for each label.

Parameters:

• df_reads (DataFrame | DataFrame) – Table of all called reads. See decode_max()

• sort_by (str | list[str]) – Which column(s) to sort aggregated barcodes by.

Returns:

Table of all labels containing sequencing reads.

Return type:

DataFrame | DataFrame